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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891252.1_cds_XP_016445995.1_40900
CDS Infomation

[gene=LOC107771177] [db_xref=GeneID:107771177] [protein=sphingosine kinase 1-like isoform X2] [protein_id=XP_016445995.1] [location=join(86946..86970,88166..88252,88376..88453,88572..88642,89106..89372,90285..90407,91867..92061)] [gbkey=CDS]
Sequence

ATGCCTCTTGGAGTAATACCTGCAGGCACTTCAAATGGGATGGCAAAATCTCTTCTAGAT
TCTGTCGGTGAATCTTGTACTGCATTTAACGCAACTCTTGCTATTATTAGAGGGCATACA
AGATCACTAGATGTAGCTACAGTTTCACAGGGGCAGAAAAGGTTTTTCAGTGTGCTAATG
CTTGCCTGGGGTCTTGTAGCTGATATAGATATAGAGTCCGAGAAGTATAGATGGATGGGT
AGTGCTCGAATGGATTTTTATGCAATACAGCGGATATTTCGTCTTAGAAGGTATACTGGC
TGTATAAAATTTTTGGCTGCACCAGGGTATGAAAATTTTGGAGAACCACTTGAACTTGAA
GGTGAAATTAATGAGCTTAACTCGAATCGGGTTCAGCAAAATTGCTATTGTGGTCCGGCT
TTTGACATGAAGGGTTTCAACCGCAAGATTGAGGGGCCTTTCGTCTCAATCTGGCTTCAT
AATGTTCCTTGGGGAGGTGAAGATGTTCTCGCAGCACCCGATGCCAAGTTTTCAGATGGT
TACTTGGACTTAGTTGTGATGAAAGATTGCTCAAAGTTATCCTTGCTGACGTTGATGAGT
GAGTTAAATAAAGGAGGTCATGTTAGATCACCGCATGTCTTGTACTTGAAGGTAAAGGCT
TTTGTTTTAGAGCCTGGTCCACGATCAGATGACTCAAACAAGGAAGGGATTATTGATGTA
GACGGTGAGGTCCTTGCCAGAGGTAGAGGAACTTACAAGTCTGAGCAGAGGACATTGATG
GCCTATGACAAGCTCCATATTGAAGTAGATCAAGGGTTGGCTACAGTATTTTCACCTGTC
TGTTAA

Peptide Sequence

PEP ID

XP_016445995.1
PEP Infomation

PREDICTED: sphingosine kinase 1-like isoform X2 [Nicotiana tabacum]
Sequence

MPLGVIPAGTSNGMAKSLLDSVGESCTAFNATLAIIRGHTRSLDVATVSQGQKRFFSVLM
LAWGLVADIDIESEKYRWMGSARMDFYAIQRIFRLRRYTGCIKFLAAPGYENFGEPLELE
GEINELNSNRVQQNCYCGPAFDMKGFNRKIEGPFVSIWLHNVPWGGEDVLAAPDAKFSDG
YLDLVVMKDCSKLSLLTLMSELNKGGHVRSPHVLYLKVKAFVLEPGPRSDDSNKEGIIDV
DGEVLARGRGTYKSEQRTLMAYDKLHIEVDQGLATVFSPVC

Transcript Sequence

Gene sequence data has not been registered.